Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927825.1_cds_XP_016475533.1_67453
CDS Infomation

[gene=LOC107797184] [db_xref=GeneID:107797184] [protein=serine/threonine-protein kinase CDL1-like isoform X2] [protein_id=XP_016475533.1] [location=join(2987..3112,4209..4306,7023..7354,13093..13542,13627..13787,14003..14076,14163..14307,14441..14590,15879..15959)] [gbkey=CDS]
Sequence

ATGGAAGCCGAGCCACTGTCCATTTTTGGAACTCACAAACGTGAAATTGAAAAAGAGGTA
ACAAAGAAGGTTGATACATATGTGAACATGCTCATGCAAAGTGCCCAAGACTGTGAAGGT
GAAGGGGTTGACATTGAAGTCAAAATTACGGCTGGGACTCCAGTAAGGAAGGTGGTTGTA
CAAGAGGTTATAACTATCGATGCGGCATGTGTTGTACTAGATAGGTACCTCAGGCGGGAT
TTGACGTATTACCTTAAACACATCCCTTGCAAAGTTGCATTAATTAGTGATAACTTGTTT
GTGAAGGTTATGAGACCTTATTCCATAATTGATGCGGACAGCATTGAGAATAAGTTATAC
TTTTCTTTGTCCAAGCAAGTACCCTTGGCACCTCCTCCGACTGAAGAAAACACAGAGCAA
TCTGTTATTTCGATGAACTACTCAGGTTCTGTGGAAAGCTCCGAAATTGCAAACAATGAA
ATGGTGACATACAAACAACCGGAGAATAGCACTTCACTCGAAGATTTTAGTGCCAATCCT
ATGCAAGAAAGATCAGGTAGGTCTGCCAGAGAGGACTTGAAGCATTCAATTCCTCCTGTT
ATTCAGAAAGAACGAAAACCACCTACATCAAGGAAATCCTCTAATACTCCATTTCTTTGT
ATTGCTTGTGGAGCAAAGACAGAACTATATATCAAGGATTCAATGAGATTCAGTTTCTCA
GAGATACAGCTGGCAACAGATTATTTTTCGAAGGATAATTTGCTTGGAGAAGGTGGATAT
GGTCGTGTATATAAAGGTCGGTTAAAAGACGGTCAGGTCATTGCTGCAAAGGTGCGGAAG
GAAGCAAGTACACAAGGCTTTTCCGAGTTTCATTCTGAAGTTTATGTTTTGAGCTTTGCA
CGTCACAGAAACATTGTTATGCTTTTGGGTTATTGCTGCAAGGAAAATGTTAACATCTTG
GTCTATGAATACATCTGCAATAATTCTCTTGAGTGGCACTTATTTGAGAATACAGAAAAT
GTCCTTGAGTGGCACTGCAGATATGCTATTGCCATCGGCACTGCAAAGGGCTTGCGTTTT
CTGCATGAAGAATGTCGTGGAGGTCCAATTATTCATCGTGACCTGAGGCCTAGCAATATA
CTGCTCACTCATGACTTTGTTCCCATGATAGGTGACTTTGGCCTGGCTAAGTGGAAGACA
GACGAGGATAAGATTTACACGAGGATACTTGGCTCGTTGGGATATCTGGCTCCTGAATAT
GCTGAAAATGGCGTTGTGTCTGTAAGAACTGATGTCTATTCATTTGGCATTGTTCTTATA
CAATTAATTTCAGGACGCAAAGCCGTAGATTCAGTGAGAGAGGGCCATCACTCCCTTAGA
CAATGGGCAATTCCACTCATTAAAAGGCTTGCATTGCATGAGCTCATCGATCCTCGCATA
GGTGACTCTTATGACACATATGAAGTGTACCACATGGCTAGAACAGCATTCATGTGTGTG
CAGAACGACCCTGAACTGCGCCCATCAATGGGAGAGGTCTTGCGTCTTCTTCAAGGGGAG
TTGGAGCATCTCCACCAGATCGTGGAGCAGTTCATTCCACATTTTATTAGTAAATAG

Peptide Sequence

PEP ID

XP_016475533.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase CDL1-like isoform X2 [Nicotiana tabacum]
Sequence

MEAEPLSIFGTHKREIEKEVTKKVDTYVNMLMQSAQDCEGEGVDIEVKITAGTPVRKVVV
QEVITIDAACVVLDRYLRRDLTYYLKHIPCKVALISDNLFVKVMRPYSIIDADSIENKLY
FSLSKQVPLAPPPTEENTEQSVISMNYSGSVESSEIANNEMVTYKQPENSTSLEDFSANP
MQERSGRSAREDLKHSIPPVIQKERKPPTSRKSSNTPFLCIACGAKTELYIKDSMRFSFS
EIQLATDYFSKDNLLGEGGYGRVYKGRLKDGQVIAAKVRKEASTQGFSEFHSEVYVLSFA
RHRNIVMLLGYCCKENVNILVYEYICNNSLEWHLFENTENVLEWHCRYAIAIGTAKGLRF
LHEECRGGPIIHRDLRPSNILLTHDFVPMIGDFGLAKWKTDEDKIYTRILGSLGYLAPEY
AENGVVSVRTDVYSFGIVLIQLISGRKAVDSVREGHHSLRQWAIPLIKRLALHELIDPRI
GDSYDTYEVYHMARTAFMCVQNDPELRPSMGEVLRLLQGELEHLHQIVEQFIPHFISK

Transcript Sequence

Gene sequence data has not been registered.